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Chemical Senses

◐ Oxford University Press (OUP)

Preprints posted in the last 30 days, ranked by how well they match Chemical Senses's content profile, based on 32 papers previously published here. The average preprint has a 0.02% match score for this journal, so anything above that is already an above-average fit.

1
The chemistry of families: Linking body odor composition to olfactory perception

Hierl, K.; Schnauber, C.; Kücklich, M.; Heinlein, B.; Birkemeyer, C.; Weiss, B. M.; Widdig, A.; Schäfer, L.

2026-09-29 ecology 10.64898/2026.09.29.755001 medRxiv
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Body odors inform human kin recognition. However, underlying chemical mechanisms and how they relate to body odor perception are still unclear. The present study therefore simultaneously examined perceptual body odor similarity according to human raters, its chemical basis and the link between the two in human families. The study included 33 raters who assessed body odors collected from 60 odor donors belonging to 15 biological families. Each family comprised a mother, a father and one adolescent same-sex sibling-dyad (8 sister dyads, 7 brother dyads). Body odor sampling was conducted with cotton pads for presentation to human raters and with thermal desorption (TD) tubes for Gas Chromatography-Mass Spectrometry (GC-MS) analysis. Relatedness and sex predicted perceived body odor similarity in parent-offspring versus unrelated control dyads. Analyses of chemical profiles revealed greater body odor similarity within families than between unrelated individuals. Parallel to the perceptual results, relatedness and sex predicted chemical similarity based on whole odor profiles. Finally, a machine-learning prediction model integrating perceptual and chemical data, revealed a small but significant positive association between chemical similarity of body odor and perceived olfactory similarity according to human raters, suggesting that odor perception is partly informed by chemical characteristics. Overall, the present study extends our understanding of human chemosensory communication and supports the notion of a family-specific olfactory signature.

2
Validation of an electronic-nose sensor array in detecting C. difficile and differentiating toxin-positive from toxin-negative stool samples

Balius, P. N.; Campbell, C.; Ikrma, M.; Nguyen, H. H.

2026-10-08 infectious diseases 10.64898/2026.10.06.26364614 medRxiv
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Objective: To evaluate the specimen-level performance of a multichannel electronic nose (e-nose) sensor array in classifying stool specimens into relevant Clostridioides difficile categories. Design: Retrospective single-center validation study with reference to polymerase chain reaction (PCR) and C. difficile toxin testing. Participants: A convenience sample of 31 discarded stool specimens with PCR and confirmatory toxin testing. Categorized into PCR-positive (+)/toxin+, PCR+/toxin-negative (-), and PCR-. Methods: Specimens were sampled in controlled headspace by two e-nose sensor arrays in 10-minute sessions with 5-second sampling intervals. The primary endpoint was one-versus rest classification performance (sensitivity, specificity, positive predictive value, and accuracy) into three classes: PCR+/toxin+, PCR+/toxin-, and PCR-. Data were normalized and the region of interest was extracted for training and testing. Random forests were utilized for classification of normalized data with a test-train split at the specimen-level. Results: There were 457 unique 10-minute sampling events (147 PCR+/toxin+, 183 PCR+/toxin-, 127 PCR-). Sensors 1 and 2 captured 20,331 and 23,538 unique 5-second exposures within the region of interest, respectively. Testing data classification accuracy was 0.79 [0.78, 0.81] and 0.84 [0.83, 0.85] for Sensors 1 and 2. Sensitivity for PCR+/toxin+ exposures was 0.82 [0.79, 0.84] and 0.94 [0.92, 0.95], and specificity was 0.91[0.90, 0.93] and 0.93 [0.92, 0.94] for Sensors 1 and 2. Conclusion: An e-nose sensor array partially differentiated PCR-classified C. difficile specimen classes at the exposure level under headspace-controlled conditions. Performance was strongest for PCR+/toxin+ exposures. Findings support further prospective validation in the hospital room setting.

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Single-point mutation alters odorant receptor sensitivity associated with host plant specialization in Spodoptera moths

Comte, A.; Lalis, M.; Zhang, S.; Thorhallsson, A.; Moracci, R.; Gevar, J.; Montagne, N.; Topin, J.; Mitchell, A.; Fiorucci, S.; Jacquin-Joly, E.

2026-09-28 molecular biology 10.64898/2026.09.24.754037 medRxiv
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Host specialization in herbivorous insects is often associated with divergence in chemosensory abilities. Here, we investigated the possible contribution of odorant receptors (ORs) in host plant restriction in the lily moth Spodoptera picta, a species specialized on Amaryllidaceae. Manual annotation of S. picta ORs in its genome revealed a repertoire similar in size and composition to those of its polyphagous sister species, S. littoralis and S. litura, suggesting that specialization did not involve major gene loss or expansion in the lily moth. To assess functional divergence beyond gene number, we applied a large scaled structure-based virtual screening approach to the entire OR repertoires of these three Spodoptera species, generating ligand-binding profiles for 120,591 volatile compounds. Among 69 1:1:1 OR orthologs, 24 exhibited divergent predicted binding spectra. We pinpointed OR29 that we also found to be highly expressed in both male and female antennae of S. picta through a RNAseq approach. Functional assays demonstrated that S. picta OR29 acquired heightened sensitivity to limonene enantiomers, volatiles emitted by host Amaryllidaceae inflorescences. Site-directed mutagenesis revealed that a single amino acid substitution within the predicted binding region underlies this shift in sensitivity. These results show that host specialization in S. picta has not been accompanied by significant OR repertoire remodeling, but rather by subtle molecular changes that fine-tune receptor sensitivity to host-derived volatiles.

4
Functional Profiling of a Human Odorant Receptor Using Olfactory Cilia Links its Activation to Odor Quality

Lempert, E.; Omura, M.; Mina, R.; Feinstein, P.

2026-09-29 neuroscience 10.64898/2026.09.23.753647 medRxiv
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The mechanism governing singular odorant receptor (OR) gene choice restricts each olfactory sensory neuron (OSN) to expressing a single OR allele from a repertoire of more than 1,100 receptor genes. Consequently, only a small fraction of OSNs express any given OR, limiting studies of OR function, axonal wiring, and odor coding. Here, we show that multimerizing a 21-bp homeodomain enhancer dramatically increases the probability of receptor choice. We engineered a single-copy Olfr151 minigene carrying a 9x21 enhancer and the human odorant receptor OR10G4, integrated at a genomic site distant from all endogenous OR clusters. This transgene drives singular OR10G4 expression in approximately 75% of OSNs and is accompanied by widespread reductions in endogenous Class I, Class II, and TAAR receptor transcripts and proteins, indicating that cis-regulatory elements govern the probability of OR selection. The abundance of OR10G4-expressing cilia enabled highly sensitive ligand screening using CELIA (Cilia-based Evaluation of Ligands and receptor InterActions). Profiling guaiacol derivatives revealed a strong correspondence among receptor activation, cAMP production, and published human psychophysical responses. Although OR10G4 responds to guaiacol-related odorants, multiple canonical vanilla odorants failed to activate the receptor, arguing against a primary role in vanilla perception. Instead, the lowest EC50 ligands were enriched for compounds human subjects described as smoky. Together, these findings link activation of a single human odorant receptor to a defined perceptual odor-quality dimension and establish a general strategy for decoding the molecular basis of human odor perception.

5
Visualising large audiological data beyond the audiogram for auditory phenotyping

Encina-Llamas, G.; Kjaerbol, E.; Kressner, A. A.

2026-09-28 otolaryngology 10.64898/2026.09.24.26363901 medRxiv
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The pure-tone audiogram remains the cornerstone of hearing assessment, yet it captures only part of the functional consequences of cochlear damage. Most phenotyping schemes rely solely on the audiogram, which cannot detect hidden suprathreshold dysfunction when thresholds are normal. How best to represent audiological data - as discrete phenotypes or as a continuous space - remains unresolved. Using a retrospective database from the Copenhagen Hearing and Balance Centre, Rigshospitalet (Denmark; 1995-2022; 251986 ear-session units from 81883 adults with normal or sensorineural audiograms), we compared linear (PCA) and non-linear (UMAP) embeddings of the audiogram alone and with word recognition in quiet (WRSmax-Q). Here we show that a linear embedding suffices for the audiogram, but a non-linear one becomes advantageous once suprathreshold measures are added. PCA compressed the audiogram onto two interpretable axes, overall level and slope, explaining 91.5% of the variance, with ears forming a continuous cloud that published reference schemes tiled into overlapping regions. For the audiogram alone, UMAP recovered the same organisation. WRSmax-Q varied widely among ears with similar audiograms; adding it left the PCA unchanged but reorganised the UMAP. A synthetic experiment illustrated this: ears with identical audiograms but different WRSmax-Q separated under UMAP, not PCA. Combining thresholds with WRSmax-Q, UMAP yielded a continuous representation - a prototype Hearing Loss Map - where each ear's position reflects threshold and suprathreshold measures. Representing hearing loss as a location in a continuous space rather than as discrete categories may better reflect its graded nature, with clinical relevance for individual patients.

6
Imaging mitral/tufted glomeruli in the mouse olfactory bulb using the genetically encoded voltage indicator ArcLight

Leong, L. M.; Lloyd, E.; Storace, D.

2026-09-28 neuroscience 10.64898/2026.09.22.753601 medRxiv
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In the mammalian olfactory bulb, each olfactory receptor neuron type maps to receptor-specific channels called glomeruli. These input axons interact with the apical dendrites of mitral/tufted cells, which are projection neurons that send axons to the olfactory cortex. Therefore, each glomerulus reflects the input-output relationship for a different olfactory receptor type, which is transformed by a complex synaptic network. While prior 2-photon Ca2+ imaging experiments have shown that the glomerular output is heterogeneous with respect to how odor concentration information is processed, the nature of voltage dynamics remains unclear. Therefore, we used the genetically encoded voltage indicator (GEVI) ArcLight to image the glomerular output in vivo in anesthetized mice. We found that ArcLight could resolve both excitatory and suppressive odor-evoked signals from mitral/tufted glomeruli. ArcLight expression remained stable over multi-week imaging sessions and successfully captured odor- and concentration-specific patterns of activation across a large concentration range. Importantly, this approach allowed us to resolve heterogeneous concentration-response sensitivities and respiratory-coupled dynamics. We also demonstrate that several newer GEVIs can similarly measure odor-evoked signals using epifluorescence imaging. Our study establishes ArcLight and other emerging GEVIs as powerful tools for dissecting how sensory information is encoded and transformed through the mouse olfactory bulb.

7
Blood epigenetic remodeling in asthma associated with biologic therapy

Martin-Almeida, M.; Perez-Garcia, J.; Martin-Gonzalez, E.; Poza-Guedes, P.; Antonio-Canas, J.; Sanchez-Machin, I.; Hernandez-Perez, J. M.; Gonzalez-Garcia, D.; Mederos-Luis, E.; Roman-Bernal, B.; Villar, J.; Valverde-Monge, M.; Betancor, D.; Rodriguez-Nieto, M. J.; Lorenzo-Diaz, F.; del Pozo, V.; Gonzalez-Perez, R.; Pino-Yanes, M.

2026-09-30 allergy and immunology 10.64898/2026.09.24.26363868 medRxiv
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Background. Polygenic risk scores (PRS) capture inherited susceptibility to asthma, whereas methylation risk scores (MRS) may reflect disease-associated epigenetic variation. We assessed whether these scores differ in patients requiring biologic therapy and whether MRS change after mepolizumab initiation. Methods. Cross-sectional analyses in the GEMAS study included 699 participants with genotype data (428 with asthma, 271 controls) and 668 with blood DNA methylation data (408 with asthma, 260 controls). We evaluated 35 existing asthma PRS and derived six MRS from published epigenomic asthma studies. Longitudinal MRS changes after mepolizumab initiation were assessed in 16 GEMAS patients and were replicated in 20 patients from the MEGA study. Results. Twenty-eight PRS differentiated biologic-treated patients from controls (areas under the curve [AUC], 0.68-0.75), but none distinguished biologic-treated and non-treated patients after multiple-testing correction. MRS was higher in asthma without biologic than in controls (odds ratio [OR], 1.64; 95% CI, 1.34-1.99) and lower in biologic-treated than in asthma without biologic patients (OR, 0.54; 95% CI, 0.35-0.81). MRS did not differ significantly between biologic-treated patients and controls. Following mepolizumab initiation, MRS decreased at 6 and 12 months in GEMAS (p=4.81x10-5 and p=2.40x10-5, respectively). The 6-month decrease was also observed in MEGA (p=3.25x10-9). MRS epigenetic markers were predominantly hypermethylated, opposite to their described pattern in asthma risk. Conclusions. Asthma PRS did not differ significantly between biologic-treated and non-biologic-treated patients, but asthma MRS were lower in biologic-treated patients. The MRS decreased after mepolizumab initiation in two independent cohorts, consistent with a reversal of asthma-associated epigenetic patterns.

8
Bill colour outperforms iris colour for sexing in Starlings Sturnus vulgaris in breeding condition

Pascual, K.; Bateson, M.

2026-09-30 zoology 10.64898/2026.09.28.755006 medRxiv
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Reliable morphological criteria for sexing birds without the need for invasive procedures are scientifically and ethically valuable. Smith et al (2005) reported that iris colour assigns the genetic sex of Starlings Sturnus vulgaris with 98% accuracy, and bill base colour with 100% accuracy when birds are in breeding condition, but these figures have not been tested independently. We applied their criteria to 31 captive Starlings in breeding condition, using three observers blind to genetic sex, two of them new to Starling sexing. Bill base colour correctly predicted genetic sex for all 29 birds scored, with complete observer agreement. Mean iris score was correct for 27 of 31 (87.1%), fewer than the 94 of 96 reported by Smith et al (2005) for birds in breeding condition (Fisher exact test, P = 0.031), although with so few errors in either study this comparison is imprecise. Observer agreement was high, so these errors reflect iris colouration conflicting with genetic sex rather than inconsistent scoring; bill base colour was correct for all four misassigned birds. Body mass and tarsus length classified 77% and 58% of birds correctly, their published thresholds missing in opposite directions. We conclude that bill base colour should be the primary criterion for sexing Starlings in breeding condition; the accuracy of iris colour should not be assumed to be 98%.

9
Epigenome-Wide Association Study of the Upper-Airway Microbiome Involved in Asthma Exacerbations

Castillo-Vargas, E.; Martin-Almeida, M.; Bozack, A. K.; Garcia, E. L.; Martin-Gonzalez, E.; Gonzalez-Perez, R.; Hernandez-Perez, J. M.; Sardon-Prado, O.; Poza-Guedes, P.; Mederos-Luis, E.; Corcuera-Elosegui, P.; Sanchez-Machin, I.; Lopez-Fernandez, L.; Rifas-Shiman, S. L.; Hashimoto, S.; Vijverberg, S. J. H.; Neerincx, A. H.; Buntrock-Döpke, H.; Gorenjak, M.; Toncheva, A. A.; Harner, S.; Brandstetter, S.; Wolff, C.; Potocnik, U.; Kabesch, M.; Kraneveld, A. D.; Villar, J.; Hivert, M.-F.; Oken, E.; Gold, D. R.; Abdel-Aziz, M. I.; Maitland-van der Zee, A. H.; Cardenas, A.; Lorenzo-Diaz, F.; Pino

2026-10-05 allergy and immunology 10.64898/2026.10.02.26364005 medRxiv
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Rationale: The role of DNA methylation (DNAm) markers in the upper-airway microbiome related to asthma exacerbations despite inhaled corticosteroid (ICS) treatment is unexplored. Objectives: To identify whole-blood DNAm markers associated with the upper-airway microbiome related to asthma exacerbations despite ICS treatment. Methods: We analyzed salivary, nasal, and pharyngeal microbiome in 242 asthma patients (GEMAS) for discovery. We tested associations between whole-blood DNAm at 703,505 CpGs and 21 exacerbation-related microbiome traits. Replication for the nasal microbiome was evaluated in 272 (Project Viva) and 66 (SysPharmPediA) children with and without asthma. We analyzed differentially methylated regions (DMRs), gene enrichment, associations with blood gene expression (RNA-seq, n=119), and DNAm predictors of plasma proteins. Measurements and Main Results: Whole-blood DNAm at 73 CpGs and 550 DMRs was associated with 17 exacerbation-related microbiome traits (false discovery rate [FDR]<0.05), including genes implicated in immune and inflammatory responses and the 17q12-q21 asthma locus ORMDL3. Most CpGs were associated with Campylobacter (pharyngeal) and Leptotrichia (nasal) abundance. Ten DNAm markers were replicated (p<0.05), including the corticosteroid insensitivity-related gene PTPRR associated with nasal bacterial richness. Enrichment analyses identified genes related to diabetes, obesity, smoking, TGF-{beta}, and Wnt signaling and regulated by trichostatin A, NF-{kappa}B, and the glucocorticoid receptor (FDR<0.05). The CpG cg18994033, associated with pharyngeal Tannerella, was associated with ITM2C whole-blood expression. Nine DNAm-predicted plasma proteins involved in inflammation, tissue remodeling, and TGF-{beta} signaling were associated with seven exacerbation-related microbiome traits, including Streptococcus and Selenomonas. Conclusions: Whole-blood DNAm markers implicated in inflammation, immunity, and asthma comorbidities are associated with the upper-airway microbiome linked to asthma exacerbations.

10
A psychophysical characterization of tactile and temperature perception on the human torso

Faresse, S.; Watkins, R. H.; Ackerley, R.

2026-10-06 neuroscience 10.64898/2026.09.30.755664 medRxiv
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Numerous studies have been conducted to investigate touch on the hand and forearm, but less is known about the rest of the body, particularly the torso and breasts, which play an important role in affective touch. We conducted psychophysical tests on three skin sites on the torso: upper breast, nipple-areola complex (NAC), and under the breast, as well as on two control sites: palm and forearm. We studied touch pleasantness and intensity by applying gentle caress-like strokes using a soft brush, and measured temperature and tactile detection thresholds. The results show an inverted U-shaped relationship for pleasantness over increasing stroking velocity for all skin sites, although we found some differences between sites, particularly at 30 cm.s-1, where participants found stroking on the NAC to be more intense and women additionally found it to be less pleasant. For temperature detection, we found that the NAC was more sensitive in men. For tactile detection, we mainly observed that the areola was far less sensitive than the other areas. Together, these results provide insights into tactile perception in the torso on a fundamental level, which can be applied to understanding how to regain sensations after mastectomy.

11
LGR5 and SOX2 expressing progenitor cells in the adult and aged human and mouse inner ear have the potential to produce Myosin 7A positive cells in vitro

Fenton, G. E.; Pieper, T.; Cleypool, C.; Sgroi, S.; Rousset, F.; de Heus, C.; Liv, N.; Thomeer, H. G.; Senn, P.; Stokroos, R. J.; Straatman, L. V.; Smith Cortinez, N.

2026-09-24 neuroscience 10.64898/2026.09.18.752313 medRxiv
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Hearing loss and deafness as a result of hair cell loss cannot be restored due to the incapacity of spontaneous regeneration of these cells. Compounds that manipulate key signaling pathways can potentially regenerate cochlear hair cells. In order to test different compounds that promote hair cell regeneration in vitro models can be used. Three-dimensional cultures have allowed the expansion and experimentation of human and mouse inner ear organoids. This is mainly performed in the embryonic or the early postnatal developmental stage. However, since the majority of patients with hearing loss are adult, it is crucial to understand the adult inner ear regenerative capacity. Here, we evaluated progenitor cell markers in the adult human and mouse inner ear and the generation, expansion and differentiation of cochlear organoids derived from the adult human and mouse inner ear. Cochlear and vestibular sensory epithelium from adult humans; and from adult and aged mice express the progenitor markers SOX2 and LGR5; and can generate organoids in vitro. By optimizing the culture conditions, organoids derived from the cochlea and vestibular organ from adult human and adult and aged mouse differentiated to Myosin 7A positive cells. This indicates that the adult inner ear has regenerative capacity. These findings are encouraging for future regenerative therapies to cure hair cell-related hearing loss and deafness.

12
Refractoriness-Based Masking Yields Threshold-Specific Human Auditory Nerve Responses

Chen, F.; Stoll, T. J.; Jones, G. R.; Maddox, R. K.

2026-09-25 neuroscience 10.64898/2026.09.19.752910 medRxiv
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Distinct auditory nerve (AN) fiber populations with varying thresholds and vulnerabilities to synaptopathy are observable in animal models, but standard non-invasive human measures lack the resolution to differentiate these groups of fibers. This fundamental limitation hinders the translation of findings in animals to human auditory pathologies. To overcome this, we developed a novel refractoriness-masking paradigm to non-invasively isolate threshold-specific AN fiber responses in humans. By presenting rapid click trains with cumulatively rising levels (45 to 105 dB peSPL) at a 250-microsecond inter-click interval, we sequentially masked lower-threshold fibers. Using a tympanic membrane electrode, we recorded compound action potentials (CAPs) in adults with normal hearing and isolated threshold-specific responses via waveform subtraction. Our results demonstrated that the isolated CAPs exhibited decreased latencies with increasing levels and a non-linear amplitude growth, plateauing at 90 dB peSPL before sharply increasing at 105 dB peSPL. This pattern reflects the sequential recruitment of AN fiber that were not effectively recruited by the preceding clicks. Validate conditions, in which the final two clicks had equal levels, produced substantially smaller CAPs, consistent with response suppression by refractoriness. Overall, this paradigm establishes a human measurement approach for characterizing level-threshold-dependent AN responses, providing a potential way to better investigate different AN pathologies, such as cochlear synaptopathy or auditory neuropathy.

13
Corazonin links social role and metabolic-stress responses in honey bee workers

Scofield, S. L.; Amdam, G. V.

2026-10-07 zoology 10.64898/2026.10.06.757184 medRxiv
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Corazonin is implicated in regulating diverse behavioral and physiological responses in insects, yet its role in honey bees remains unclear. Work in social and non-social species suggests an ancestral function for corazonin as a metabolic stress signal and a derived function as a pro-foraging signal in social insects. To investigate this hypothesis, we examined corazonin signaling across worker roles and metabolic states and tested its regulatory relationships with pathways central to worker division of labor. Central corazonin levels (both transcript and peptide) were approximately threefold higher in foragers than in nurses. Acute metabolic challenge did not alter brain corazonin but strongly upregulated fat body corazonin receptor (CrzR) transcript in nurses only, suggesting role-specific induction of peripheral sensitivity to corazonin signaling. Injection of synthetic corazonin decreased fat body insulin receptor substrate transcript, while transcripts of vitellogenin (Vg), unpaired-like A, ecdysone receptor B, and Cyp314a1 were unaffected. Measures of gustatory responsiveness, starvation resistance, and hemolymph sugar levels were similarly unaffected by corazonin injection. Reducing Vg through RNA interference in nurse-age bees did not affect CrzR transcript levels, despite vitellogenin's established roles in stress buffering, antioxidant defense, and lifespan. This contrast highlights the specificity of CrzR upregulation in nurses as a response to metabolic challenge rather than general stress. Together, these findings support corazonin as a co-opted nutritional signal that helps shape the forager physiological state, suggesting that it may act in part through interactions with insulin signaling rather than directly regulating classical nutritional or stress-response pathways.

14
Spatial hearing in adults with sequential bilateral cochlear implants: a longitudinal prospective cohort study

Valzolgher, C.; Ghiselli, S.; Epifania, M. O.; Gullotta, J.; Zanetti, D.; Lilli, G.; Di Berardino, F.; Pozzi, M.; Ciorba, A.; Borin, M.; Brunelli, N.; Musumano, L. B.; Frau, G. N.; Tromballi, G.; Chini, A.; Rosi, T.; Malerba, P.; Cuda, D.; Pavani, F.

2026-10-06 otolaryngology 10.64898/2026.10.01.26364332 medRxiv
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Bilateral cochlear implantation (BCI) can improve spatial hearing in adults with bilateral hearing loss, but the early development of spatial hearing following sequential BCI remains poorly understood. This prospective longitudinal study investigated changes in spatial hearing experience in 23 adults undergoing sequential BCI, assessed before and at ~1, 3, and 8 months after bilateral implantation under two conditions: spontaneous and restrained head movements. Using a motion-tracking system combined with virtual reality, sound localization was assessed through absolute and signed errors, along with self-reported localization confidence and listening effort. Subjective spatial hearing was also assessed using the Speech, Spatial and Qualities of Hearing Scale (SSQ). Localization performance improved by 1 month after bilateral implantation, as evidenced by a reduction of absolute error and in the bias toward the first-implanted ear. Participants reported greater localization confidence and lower listening effort at 1 month, although these changes were not consistently maintained at later follow-ups. SSQ scores showed improved spatial hearing at 1 month, speech perception at 3 months, and sound clarity and discriminability at 8 months. Compared with head-restrained condition, accuracy and confidence improved when spontaneous head rotations were allowed. The temporal trajectories of localization bias, confidence, and effort were modulated by the duration of experience with the first CI. These findings indicate that changes in spatial hearing can emerge soon after second CI activation. They further highlight the contribution of spontaneous head movements and previous CI experience, and support the use of complementary measures to monitor the early development of bilateral listening.

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Volatile Metabolic Signatures Reveal Early Pulmonary Responses to PFAS Exposure

Agorsor, P.-I.; Lin, T.-C.; Huang, Y.-W.; Eze, M. O.

2026-09-24 biochemistry 10.64898/2026.09.23.753921 medRxiv
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Inhalation of airborne per- and polyfluoroalkyl substances (PFAS) represents an important yet understudied exposure route. While volatile organic compounds (VOCs) have been widely explored as biomarkers of toxicant exposure, their potential for early detection of PFAS-induced pulmonary toxicity remains largely unexplored. This study investigated VOC profiles in human alveolar (A549) and bronchial (BEAS-2B) epithelial cells following exposure to environmentally relevant PFAS concentrations (1, 5, and 10 ppb) for 12, 24, and 48 h. VOCs were analyzed using headspace solid-phase microextraction coupled with gas chromatography-Orbitrap mass spectrometry. We observed significant concentration- and time-dependent alterations in VOC profiles in both cell models. The principal VOCs associated with PFAS exposure include butanal, acetone, 2-butanone, 2-nonanone, (E)-2-nonenal, (E)-2-octenal, (E)-2-heptenal, 2,4-heptadienal, 2,4-nonadienal, 2,4-decadienal, 1-pentanol, and 1-hexanol. Cell type-specific regulations were observed, reflecting differential metabolic responses between transformed and non-transformed lung epithelial cells. Metabolite set enrichment analysis indicated perturbations in ketone body metabolism, consistent with altered cellular energy metabolism. Complementary qPCR analysis revealed altered expressions of CYP1A1, CYP2E1, ALDH1A1, and ALDH2, supporting a mechanistic link between PFAS exposure and oxidative stress, lipid peroxidation, and impaired aldehyde detoxification. These findings demonstrate that VOC profiling, combined with transcriptional analysis, can reveal PFAS-induced metabolic perturbations in pulmonary epithelial cells.

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Molecular signatures of genetically defined jugular nociceptors and their responses to allergic airway inflammation

Wang, Y.; Lawson, K.; Stewart, R.; Tang, S.; Wu, S.; Chang, M. Y.; Yella, V. V.; Ramsey, H. L.; Yang, J.; Han, L.

2026-09-30 neuroscience 10.64898/2026.09.24.753851 medRxiv
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Abstract Rationale: Vagal sensory neurons are molecularly and functionally diverse, and they play critical roles in visceral sensation and homeostasis. The vagal system is anatomically divided into jugular and nodose ganglia, which exhibit distinct peripheral innervation patterns and physiological functions. Although recent transcriptomic studies have characterized nodose neuronal subtypes in detail, the molecular profiles of jugular sensory neurons remain poorly defined. Objectives: To define the molecular profiles of genetically identified jugular sensory neurons and determine the transcriptional responses of jugular and nodose airway afferents to allergic airway inflammation. Methods: We performed deep transcriptomic profiling of two genetically defined jugular nociceptor populations, MrgprC11 and MrgprD neurons, and compared them with airway-innervating P2ry1 nodose neurons and Phox2b nodose neurons. We further examined transcriptional changes of MrgprC11 and P2ry1 neurons following OVA-induced allergic airway inflammation. Measurements and Main Results: Transcriptomic analyses revealed distinct molecular signatures of jugular nociceptive neurons and identified subtype-specific genes across diverse functional categories. Following OVA challenge, MrgprC11 and P2ry1 neurons exhibited strikingly divergent transcriptional responses. More than 400 genes that were differentially expressed in both neuronal populations were regulated in opposite directions. GO enrichment analysis suggested that MrgprC11 jugular neurons adopted a metabolically restrained state with reduced translation and bioenergetic activities, whereas P2ry1 nodose neurons exhibited metabolically active state with enhanced translation and bioenergetic activities. Conclusions: These findings provide new insight into vagal sensory neuron diversity and reveal distinct transcriptional adaptations of jugular and nodose airway afferents during allergic inflammation.

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Why Have Drug Names Become So Weird? A Retrospective Analysis of the Orthographic Distinctiveness of Proprietary and Generic Names Across Four Decades of FDA Approvals

Lambert, B. L.

2026-10-16 health systems and quality improvement 10.64898/2026.10.15.26365645 medRxiv
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Background. Regulatory pressure to avoid confusingly similar drug names appears to have pushed manufacturers to coin more distinctive proprietary names, but no one has quantitatively analyzed this trend. Objective. To determine whether proprietary drug names became more orthographically distinctive (unusual in spelling) over time. Methods. We examined 1,321 US Food and Drug Administration (FDA) new molecular entity (NME) names (1985-2024), 2,769 FDA Orange Book trade names (1982-2026), 177,337 US pharmaceutical trademarks (1980-2026), and 1,273 generic names (1982-2025). Compared to prior names (including those already marketed) and ordinary English, we scored each name's character trigram (three-letter sequence) surprisal (statistical unexpectedness) and its edit-distance similarity to the closest existing names. Linear regression tested time trends, controlling for name length. Results. Mean NME trigram surprisal rose in every decade between the 1980s and 2020s, from 7.21 to 8.50 nats (natural-logarithm units, higher meaning less predictable), an 18% increase (b = 0.038, p < .001, R2 = 0.34). Half of 2020s names (7% in the 1980s) contained a letter sequence found in no common English word (e.g., Jesduvroq, Omvoh). Nearest-neighbor similarity fell after the early 1990s. Trademark data showed the same trend (b = 0.016, p < .001). Generic names showed a weaker trend (b = 0.011, R2 = 0.063). Conclusions. Over four decades, drug names became more orthographically distinctive, consistent with namespace crowding, deliberate efforts to avoid confusing names, and branding strategy. Because unfamiliar letter sequences can introduce other error pathways, increased distinctiveness does not necessarily imply improved safety.

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A rapid, machine-learning readout of cochlear neural degeneration that transfers from animals to humans

Andrino, L. S.; Gall, R.; Klara, J.; Akcakaya, M.; Bartlett, E. L.; Parthasarathy, A.

2026-09-30 neuroscience 10.64898/2026.09.24.754199 medRxiv
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Standard hearing tests miss cochlear neural degeneration (CND), the loss of synapses between inner hair cells and auditory nerve fibers that may underlie unexplained hearing difficulty in roughly one in ten adults. Envelope following responses (EFRs) can index this neural loss noninvasively, but conventional protocols are too slow for clinical use. We tested a dynamic amplitude-modulated (dAM) EFR that sweeps the full modulation spectrum in a single brief stimulus. In Mongolian gerbils with histologically verified CND, dAM EFRs revealed selective deficits at fast modulation rates without threshold elevation. A machine-learning classifier distinguished young from middle-aged animals with high accuracy; additionally, its most informative feature, power near 400-500 Hz, tracked synapse counts, indicating a readout of cochlear neural health rather than age. Applied without retraining to 56 human listeners, the gerbil-trained classifier separated age groups above chance. dAM EFRs thus offer a rapid, objective and clinically viable marker of CND.

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Associations between commonly consumed beverages and the oral microbiome in three US cohort studies

Ferro, L. E.; Anyaso-Samuel, S.; Yano, Y.; Wan, Y.; Hua, X.; Chang, V. C.; Dagnall, C. L.; Jones, K.; Hicks, B. D.; Hutchinson, A.; Liao, L. M.; Huang, W.-Y.; Freedman, N. D.; Beane Freeman, L. E.; Sandler, D. P.; Abnet, C. C.; Shi, J.; Sinha, R.; Loftfield, E.; Vogtmann, E.

2026-10-09 epidemiology 10.64898/2026.10.07.26364990 medRxiv
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Multiple external factors shape human microbial communities. Beverages represent particularly frequent dietary exposures that may impact oral microbiome composition. We examined associations of coffee, tea, alcohol, sugar-sweetened beverages, artificially-sweetened beverages, and fruit juice consumption with the oral microbiome in three large cohort studies (n=5,598). Beverage consumption was assessed by food frequency questionnaire and categorized as non-consumers and tertiles of intake among consumers, except fruit juice, which was categorized into quartiles. DNA from oral wash specimens was sequenced (16S rRNA, V4 region). Associations with alpha and beta diversity and individual genera were assessed using multivariable linear, logistic, count-based regression models and weighted permutation-based models accounting for multiple comparisons in genus-level analyses. Only alcoholic beverage consumption was associated with all alpha diversity metrics; the highest tertile of alcohol drinking was associated with 10.18 (95% CI: 5.56, 14.80) greater observed amplicon sequence variants vs. non-consumers. All beverages accounted for 4.06% of variability in beta diversity (unweighted UniFrac); in univariable models, alcoholic beverages had the largest R2 among individual beverages (0.86%) and accounted for the majority (25/28, 89.3%) of genus-level associations, mostly with beer and liquor. For example, high alcoholic beverage intake (T3 vs. non-consumers) was associated with 2.25 and 2.17 times the odds of having Megasphaera and Peptostreptococcus, respectively, and 23% lower abundance of Lautropia. Alcoholic beverage consumption was strongly associated with oral microbes, including taxa linked to poor oral health; these findings suggest that alcohol-associated differences in the oral microbiome may have implications for oral and systemic health.

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PFAS and phthalates in follicular fluid of a Nebraska in vitro fertilization (IVF) cohort

Taiba, J.; Balu, N.; Castillo, A. C.; Barakat, R.; Lee, C.; Chen, A.; Gustin, S.; Constance, E.; Davis, J. S.; Bell, J. E.; Clark, K. L.

2026-09-29 obstetrics and gynecology 10.64898/2026.09.21.26363443 medRxiv
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Per- and polyfluoroalkyl substances (PFAS) and phthalate metabolites are understudied in follicular fluid of women undergoing assisted reproduction. We characterized these in previously collected follicular fluid from patients at a Nebraska fertility clinic (August 2022 to June 2025) and retrieved demographics and clinical characteristics from fertility records. Spearman correlations and nonparametric tests evaluated PFAS and phthalate correlations and exposure differences by age, race, BMI, and urbanicity. Seven PFAS and four phthalate metabolites were detected in at least half of participants. PFOS and PFHxS concentrations were higher in younger women, and mono-isobutyl phthalate (MiBP) was higher in younger and non-White women. PFAS and phthalate correlations were weak, and exposures did not differ by urbanicity, indicating multiple chemical exposures in follicular fluid with sociodemographic disparities.